Apparently my code is AI generated (Except it's not)

Is this a problem???

I don't see a problem here. Some tool reported a false positive, happens all the time.

Should my code be messier???

Please, no!

Will people think my code is ai?

If they use crappy AI detection tools: probably yes.
It's their own problem, though.

Suppose you applied for a job and somebody turned you down because they blindly trust a flawed tool, would you want to work in that place?

I have the same problem!!!!!!!!

Yet another example (as if we needed one) that demonstrates that AI is not infallible.

Should my code be messier???

A tad sarcastic here, but, well, maybe... just for those b tools (and their users). It's not entirely related to AI, though, some people "need" to find something to judge negatively, otherwise they feel useless, so let's give them a bone to gnaw. See the remotely related duck-design-story from Battle Chess: https://www.simplethread.com/looks-great-lose-the-duck/ .

But in your professional day-to-day work, please continue be good (organized, clean and predictable). This actually also helps AI tools to go faster and better, like it will help your teammates and your project.

I was getting comments such as: "too clean and too organized," "consistent naming conventions", "direct comments explaining the code"

I had to laugh at this. What happens when AI produces clean, well-organized code with consistent naming conventions?

Missing. F*g. Accomplished.

In all seriousness, though, try removing comments that explain the code and run it through the tool again. Some related Software Engineering questions:

• What's wrong with comments that explain complex code?
• Coding standard for clarity: comment every line of code?